accelerate==1.12.0
acvl_utils==0.2.6
aiofiles==25.1.0
alabaster==1.0.0
altair==6.0.0
anndata==0.12.10
annotated-types==0.7.0
anthropic==0.86.0
anyio==4.12.0
appnope==0.1.4
arel==0.4.0
argon2-cffi==25.1.0
argon2-cffi-bindings==25.1.0
array-api-compat==1.13.0
asttokens==3.0.0
async-asgi-testclient==1.4.11
attrs==25.4.0
av==16.0.1
babel==2.18.0
batchgenerators==0.25.1
batchgeneratorsv2==0.3.2
beautifulsoup4==4.14.3
bidict==0.23.1
biopython==1.86
biothings_client==0.4.1
black==26.3.1
blinker==1.9.0
blosc2==4.2.0
cacheout==0.14.1
cachetools==5.5.0
certifi==2025.10.5
cffi==2.0.0
chandra-ocr==0.1.8
charset-normalizer==3.4.4
click==8.3.1
cloudpickle==3.1.2
coloredlogs==15.0.1
com2ann==0.3.0
comm==0.2.3
confluent-kafka==2.13.2
connected-components-3d==3.28.0
contourpy==1.3.3
cryptography==46.0.3
cycler==0.12.1
cyvcf2==0.32.1
dask==2026.1.2
debugpy==1.8.17
decorator==5.2.1
dicom2nifti==2.6.2
distinctipy==1.3.4
distro==1.9.0
dnspython==2.8.0
docstring_parser==0.17.0
docutils==0.22.4
donfig==0.8.1.post1
duckdb==1.5.1
dynamic_network_architectures==0.4.3
einops==0.8.2
email-validator==2.3.0
et_xmlfile==2.0.0
executing==2.2.1
fastapi==0.119.1
ffmpeg-python==0.2.0
fhir.resources==7.1.0
filelock==3.20.1
filetype==1.2.0
Flask==3.1.2
fonttools==4.60.1
fsspec==2025.12.0
future==1.0.0
gitdb==4.0.12
GitPython==3.1.45
giturlparse==0.14.0
google-crc32c==1.8.0
graphviz==0.21
grpcio==1.78.0
grpcio-reflection==1.78.0
grpcio-tools==1.78.0
gseapy==1.1.10
h11==0.16.0
h2==4.3.0
h5py==3.15.1
hf-xet==1.2.0
hmmlearn==0.3.3
hpack==4.1.0
httpcore==1.0.9
httptools==0.7.1
httpx==0.27.2
huggingface-hub==0.36.0
humanfriendly==10.0
hyperframe==6.1.0
idna==3.11
imagecodecs==2026.5.10
ImageIO==2.37.3
imagesize==2.0.0
imutils==0.5.4
iniconfig==2.3.0
ipykernel==7.1.0
ipython==9.7.0
ipython_pygments_lexers==1.1.1
itsdangerous==2.2.0
jedi==0.19.2
Jinja2==3.1.6
jiter==0.12.0
joblib==1.5.3
jsonpatch==1.33
jsonpointer==3.0.0
jsonschema==4.23.0
jsonschema-specifications==2025.9.1
jupyter_client==8.6.3
jupyter_core==5.9.1
kiwisolver==1.4.9
lance-namespace==0.4.5
lance-namespace-urllib3-client==0.4.5
lazy-loader==0.5
legacy-api-wrap==1.5
libcst==1.8.6
linecache2==1.0.0
locket==1.0.0
Markdown==3.10.2
markdown-it-py==4.0.0
markdownify==1.1.0
MarkupSafe==2.1.5
matplotlib==3.10.7
matplotlib-inline==0.2.1
mdurl==0.1.2
minio==7.2.20
ml_dtypes==0.5.4
mpmath==1.3.0
msgpack==1.1.2
multidict==6.7.0
mygene==3.2.2
mypy_extensions==1.1.0
narwhals==2.14.0
natsort==8.4.0
ndiff==7.96
ndindex==1.10.1
nest-asyncio==1.6.0
networkx==3.6.1
nibabel==5.4.2
nnunetv2==2.7.0
numcodecs==0.16.5
numerize==0.12
numexpr==2.14.1
numpy==2.4.3
numpydoc==1.10.0
onnx==1.21.0
openai==2.9.0
opencv-python==4.12.0.88
openpyxl==3.1.5
packaging==25.0
pandas==2.3.3
parso==0.8.5
partd==1.4.2
pathspec==1.0.4
patsy==1.0.2
pdfminer.six==20251107
pdfplumber==0.11.8
pexpect==4.9.0
pillow==10.4.0
platformdirs==4.5.0
pluggy==1.6.0
portalocker==3.2.0
prompt_toolkit==3.0.52
protobuf==6.33.2
psutil==7.1.3
PTable==0.9.2
ptyprocess==0.7.0
pure_eval==0.2.3
pyarrow==22.0.0
pybedtools==0.12.0
pyBigWig==0.3.25
pycairo==1.28.0
pycparser==2.23
pycryptodome==3.23.0
pydantic==2.12.3
pydantic-settings==2.12.0
pydantic_core==2.41.4
pydeck==0.9.1
pydicom==3.0.2
Pygments==2.19.2
PyJWT==2.10.1
pylance==1.0.4
pymol==3.1.0
PyMuPDF==1.27.2.2
pynrrd==0.4.3
pyparsing==3.2.5
pypdfium2==5.2.0
PyQt6==6.11.0
PyQt6-3D==6.11.0
PyQt6-Charts==6.11.0
PyQt6-DataVisualization==6.11.0
PyQt6-NetworkAuth==6.11.0
PyQt6-WebEngine==6.11.0
PyQt6_sip==13.11.1
pysam==0.23.3
pytest==9.0.2
pytest-asyncio==1.3.0
python-dateutil==2.9.0.post0
python-dotenv==1.2.1
python-gdcm==3.2.6
python-json-logger==2.0.7
python-magic==0.4.27
python-multipart==0.0.12
pytokens==0.4.1
pytz==2025.2
pyupgrade==3.21.2
PyYAML==6.0.3
pyzmq==27.1.0
qdrant-client==1.17.1
qwen-vl-utils==0.0.14
redis==7.4.0
referencing==0.37.0
regex==2025.11.3
reportlab==4.4.10
requests==2.32.5
requests-toolbelt==1.0.0
rich==14.2.0
roman-numerals==4.1.0
rpds-py==0.30.0
ruff==0.15.8
safetensors==0.7.0
scikit-allel==1.3.13
scikit-image==0.26.0
scikit-learn==1.8.0
scipy==1.16.3
seaborn==0.13.2
sentence-transformers==5.3.0
setuptools==80.9.0
shapely==2.1.2
shed==2025.6.1
SimpleITK==2.4.1
six==1.17.0
smmap==5.0.2
sniffio==1.3.1
snowballstemmer==3.0.1
soupsieve==2.8
Sphinx==9.1.0
sphinxcontrib-applehelp==2.0.0
sphinxcontrib-devhelp==2.0.0
sphinxcontrib-htmlhelp==2.1.0
sphinxcontrib-jsmath==1.0.1
sphinxcontrib-qthelp==2.0.0
sphinxcontrib-serializinghtml==2.0.0
sse-starlette==3.0.3
stack-data==0.6.3
starlette==0.47.3
statsmodels==0.14.5
streamlit==1.52.2
stringcase==1.2.0
supervisely==6.73.479
sympy==1.14.0
tenacity==9.1.2
terminusdb-client==10.2.4
threadpoolctl==3.6.0
tifffile==2026.5.2
timm==1.0.22
tokenize_rt==6.2.0
tokenizers==0.22.1
toml==0.10.2
toolz==1.1.0
torch==2.11.0
torchvision==0.26.0
tornado==6.5.2
TotalSegmentator==2.13.0
tqdm==4.67.1
traceback2==1.4.0
traitlets==5.14.3
transformers==4.57.3
trimesh==4.5.0
typeguard==2.13.3
typing-inspection==0.4.2
typing_extensions==4.15.0
tzdata==2025.2
unittest2==1.1.0
urllib3==2.2.3
uvicorn==0.38.0
uvloop==0.22.1
varname==0.15.1
watchfiles==1.1.1
wcwidth==0.2.14
websockets==13.1
Werkzeug==3.1.4
wheel==0.46.3
xmltodict==1.0.4
xvfbwrapper==0.2.23
yacs==0.1.8
zarr==3.1.5
zstd==1.5.7.2